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Table 1 Proposed functions of paulomycin biosynthesis cluster deduced proteins from S. albus J1074

From: New insights into paulomycin biosynthesis pathway in Streptomyces albus J1074 and generation of novel derivatives by combinatorial biosynthesis

S. albus J1074a

Cluster proteins

Proposed function

S. paulus NRRL8115b

Streptomyces sp. YN86c

SSHG_05310

 

RNA polymerase sigma factor

Pau1 (98/98)

PauY1 (98/99)

SSHG_05311

 

M23 family peptidase

Pau2 (99/100)

PauY2 (99/100)

SSHG_05312

 

Putative aminotransferase

Pau3 (100/100)

PauY3 (99/99)

SSHG_05313

Plm1

TetR-family transcriptional regulator

Pau4 (99/100)

PauY4 (100/100)

SSHG_05314

Plm2

LuxR-family transcriptional regulator

Pau5 (94/94)

PauY5 (96/96)

SSHG_05315

Plm3

Isovaleryltransferase

Pau6 (100/100)

PauY6 (99/99)

SSHG_05316

Plm4

Oxidoreductase

Pau7 (100/100)

PauY7 (98/99)

SSHG_05317

Plm5

Conserved hypothetical protein

Pau8 (100/100)

PauY8 (100/100)

SSHG_05318

Plm6

EmrB/QacA subfamily transporter

Pau9 (100/100)

PauY9 (99/99)

SSHG_05319

Plm7

Elongation factor G 1

Pau10 (99/99)

PauY10 (99/99)

SSHG_05320

Plm8

Dehydrogenase E1 alpha subunit

Pau11 (100/100)

PauY11 (99/99)

SSHG_05321

Plm9

Dehydrogenase E1 beta subunit

Pau12 (99/99)

PauY12 (99/99)

SSHG_05322

Plm10

SARP-family transcriptional regulator

Pau13 (99/100)

PauY13 (100/100)

SSHG_05323

Plm11

Cytochrome P450-like

Pau14 (99/99)

PauY14 (98/99)

SSHG_05324

Plm12

Glycosyltransferase

Pau15 (99/99)

PauY15 (99/99)

SSHG_05325

Plm13

NDP-hexose 2,3-dehydratase

Pau16 (99/99)

PauY16 (99/99)

SSHG_05326

Plm14

3-hydroxybenzoate 6-hydroxylase

Pau17 (99/100)

PauY17 (99/99)

SSHG_05327

Plm15

Anthranilate synthase

Pau18 (99/99)

PauY18 (99/99)

SSHG_05328

Plm16

Isochorismatase

Pau19 (99/99)

PauY19 (99/99)

SSHG_05329

Plm17

2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

Pau20 (99/99)

PauY20 (99/99)

SSHG_05330

Plm18

3-deoxy-D-arabino-heptulosonate-7-phosphate synthase

Pau21 (99/99)

PauY21 (99/99)

SSHG_05331

Plm19

Predicted GCN5-related N-acetyltransferase

SSHG_05332

Plm20

dTDP-glucose 4,6-dehydratase

Pau22 (99/99)

PauY22 (99/99)

SSHG_05333

Plm21

D-glucose-1-phosphate synthase

Pau23 (99/99)

PauY23 (99/99)

SSHG_05334

Plm22

Isovaleryltransferase

Pau24 (99/99)

PauY24 (99/99)

SSHG_05335

Plm23

C-glycosyltransferase

Pau25 (100/100)

PauY25 (99/99)

SSHG_05336

Plm24

Glyoxalase

Pau26 (99/100)

PauY26 (99/100)

SSHG_05337

Plm25

FAD-binding monooxygenase

Pau27 (99/100)

PauY27 (99/99)

SSHG_05338

Plm26

Hypothetical protein, Reductase

Pau28 (99/99)

PauY28 (99/99)

SSHG_05339

Plm27

3-oxoacyl-ACP synthase III

Pau29 (99/99)

PauY29 (100/100)

SSHG_05340

Plm28

Putative sulfotransferase

Pau30 (100/100)

PauY30 (99/98)

SSHG_05341

Plm29

Aminotransferase

Pau31 (99/100)

PauY31 (98/98)

SSHG_05342

Plm30

LuxR-family transcriptional regulator

Pau32 (100/100)

PauY32 (100/100)

SSHG_05343

Plm31

Oxidoreductase

Pau33 (99/99)

PauY33 (98/98)

SSHG_05344

Plm32

Acyl-CoA synthase

Pau34 (99/99)

PauY34 (100/100)

SSHG_05345

Plm33

Acyl-carrier protein

Pau35 (100/100)

PauY35 (100/100)

SSHG_05346

Plm34

Dihydrodipicolinate reductase

Pau36 (100/100)

PauY36 (100/100)

SSHG_05347

Plm35

Ribulose-5-phosphate 4-epimerase

Pau37 (99/99)

PauY37 (100/100)

SSHG_05348

Plm36

4′-phosphopantetheinyl transferase

Pau38 (99/99)

PauY38 (100/100)

SSHG_05349

Plm37

Acyl-CoA dehydrogenase

Pau39 (99/100)

PauY39 (99/99)

SSHG_05350

Plm38

Hypothetical protein

Pau40 (98/100)

PauY40 (97/99)

SSHG_05351

Plm39

Pyranose oxidase

Pau41 (100/100)

PauY41 (100/100)

SSHG_05352

Plm40

dTDP-4-keto-6-deoxy-L-hexose 2,3-reductase

Pau42 (99/99)

PauY42 (99/99)

SSHG_05353

Plm41

dTDP-6-deoxy-L-hexose 3-O- methyltransferase

Pau43 (100/100)

PauY43 (100/100)

SSHG_05354

Plm42

dTDP-4-keto-6-deoxyhexose 3,5-epimerase

Pau44 (100/100)

PauY44 (100/100)

SSHG_05355

 

Malate synthase

Pau45 (99/100)

PauY45 (99/100)

SSHG_05356

 

Oxidoreductase

Pau46 (97/98)

PauY46 (98/98)

SSHG_05357

 

Oxidoreductase

Pau47 (100/100)

PauY47 (99/99)

  1. The correlation of S. albus J1074 proteins with orthologues from S. paulus NRRL8115 and Streptomyces sp. YN86 paulomycin biosynthesis gene clusters is shown
  2. a Proteins corresponding to nucleotide accession number NZ_DS999645.1
  3. b Proteins corresponding to nucleotide accession number KJ721164.1. % identity/similarity (in parenthesis)
  4. c Proteins corresponding to nucleotide accession number KJ721165.1. % identity/similarity (in parenthesis)