Prophage recombinases-mediated genome engineering in Lactobacillus plantarum

Table 1 Proteins with similarity to L. plantarum Lp_0640, Lp_0641 and Lp_0642

Source organisms	Lp_0640	Lp_0641		Lp_0642
Source organisms	Gene	Gene	Identity (%)	Gene	Identity (%)
L. paraplantarum	HR47_13610	HR47_13605	96	HR47_13600	89
L. pentosus IG1	LPENT_03271 ^a	LPENT_03270	95	LPENT_03269	84
L. paracasei N1115		AF91_11175	56	AF91_11170	54
L. rhamnosus LRHMDP2	LRHMDP2_1610 ^a	LRHMDP2_1611	56	LRHMDP2_1612	56
L. buchneri NRRL B-30929	Lbuc_1445 ^a	Lbuc_1444	55	Lbuc_1443	48
L. brevis KB290	LVISKB_1732 ^a	LVISKB_1731	40	LVISKB_1730	53
L. casei 12A		LCA12A_0940	43	LCA12A_0939	56
L. fermentum 3872		N573_02575	44	N573_02570	42
L. reuteri JCM 1112		LAR_0775	45	LAR_1074	45
S. pyogenes		FE90_0912	43	FE90_0180	44
S. agalactiae CCUG 91		SAG0049_02245	45	SAG0049_02250	44
E. faecalis 599		HMPREF1327_00926	47	HMPREF1327_00925	45
E. faecium EnGen0024	OK7_04346 ^a	OK7_04347	40	OK7_04348	43
E. mundtii QU 25	EMQU_0764 ^a	EMQU_0765	42	EMQU_0766	45
E. hirae EnGen0127		SE1_00426	40	SE1_00427	45
E. flavescens ATCC 49996		I582_02415	41	I582_02414	44
E. raffinosus ATCC 49464		I590_00671	40	I590_00670	44

^a Genes that locate within the same operon as their potential SSAP and exonuclease partner but not related with Lp_0640 at either nucleotide sequence or amino acid sequence level. These genes are similar to lp_0640 in size

ISSN: 1475-2859