TY - JOUR AU - Colin, V. L. AU - Rodriguez, A. AU - Cristobal, H. A. PY - 2011 DA - 2011// TI - The role of synthetic biology in the design of microbial cell factories for biofuel production JO - J Biomed Biotechnol VL - 2011 UR - https://doi.org/10.1155/2011/601834 DO - 10.1155/2011/601834 ID - Colin2011 ER - TY - JOUR AU - Carothers, J. M. AU - Goler, J. A. AU - Keasling, J. D. PY - 2009 DA - 2009// TI - Chemical synthesis using synthetic biology JO - Curr Opin Biotechnol VL - 20 UR - https://doi.org/10.1016/j.copbio.2009.08.001 DO - 10.1016/j.copbio.2009.08.001 ID - Carothers2009 ER - TY - JOUR AU - Alper, H. AU - Jin, Y. S. AU - Moxley, J. F. AU - Stephanopoulos, G. PY - 2005 DA - 2005// TI - Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli JO - Metab Eng VL - 7 UR - https://doi.org/10.1016/j.ymben.2004.12.003 DO - 10.1016/j.ymben.2004.12.003 ID - Alper2005 ER - TY - JOUR AU - Alper, H. AU - Stephanopoulos, G. PY - 2008 DA - 2008// TI - Uncovering the gene knockout landscape for improved lycopene production in E. coli JO - Appl Microbiol Biotechnol VL - 78 UR - https://doi.org/10.1007/s00253-008-1373-x DO - 10.1007/s00253-008-1373-x ID - Alper2008 ER - TY - JOUR AU - Choi, H. S. AU - Lee, S. Y. AU - Kim, T. Y. AU - Woo, H. M. PY - 2010 DA - 2010// TI - In silico identification of gene amplification targets for improvement of lycopene production JO - Appl Environ Microbiol VL - 76 UR - https://doi.org/10.1128/AEM.00115-10 DO - 10.1128/AEM.00115-10 ID - Choi2010 ER - TY - JOUR AU - Goodwin, T. W. PY - 1986 DA - 1986// TI - Metabolism, nutrition, and function of carotenoids JO - Annu Rev Nutr VL - 6 UR - https://doi.org/10.1146/annurev.nu.06.070186.001421 DO - 10.1146/annurev.nu.06.070186.001421 ID - Goodwin1986 ER - TY - JOUR AU - Fraser, M. L. AU - Lee, A. H. AU - Binns, C. W. PY - 2005 DA - 2005// TI - Lycopene and prostate cancer: emerging evidence JO - Expert Rev Anticancer Ther VL - 5 UR - https://doi.org/10.1586/14737140.5.5.847 DO - 10.1586/14737140.5.5.847 ID - Fraser2005 ER - TY - JOUR AU - Hughes, D. A. PY - 1999 DA - 1999// TI - Effects of carotenoids on human immune function JO - Proc Nutr Soc VL - 58 UR - https://doi.org/10.1017/S0029665199000932 DO - 10.1017/S0029665199000932 ID - Hughes1999 ER - TY - JOUR AU - Farmer, W. R. AU - Liao, J. C. PY - 2000 DA - 2000// TI - Improving lycopene production in Escherichia coli by engineering metabolic control JO - Nat Biotechnol VL - 18 UR - https://doi.org/10.1038/75398 DO - 10.1038/75398 ID - Farmer2000 ER - TY - JOUR AU - Rodriguez-Villalon, A. AU - Perez-Gil, J. AU - Rodriguez-Concepcion, M. PY - 2008 DA - 2008// TI - Carotenoid accumulation in bacteria with enhanced supply of isoprenoid precursors by upregulation of exogenous or endogenous pathways JO - J Biotechnol VL - 135 UR - https://doi.org/10.1016/j.jbiotec.2008.02.023 DO - 10.1016/j.jbiotec.2008.02.023 ID - Rodriguez-Villalon2008 ER - TY - JOUR AU - Jin, Y. S. AU - Stephanopoulos, G. PY - 2007 DA - 2007// TI - Multi-dimensional gene target search for improving lycopene biosynthesis in Escherichia coli JO - Metab Eng VL - 9 UR - https://doi.org/10.1016/j.ymben.2007.03.003 DO - 10.1016/j.ymben.2007.03.003 ID - Jin2007 ER - TY - JOUR AU - Kang, M. J. AU - Lee, Y. M. AU - Yoon, S. H. AU - Kim, J. H. AU - Ock, S. W. AU - Jung, K. H. PY - 2005 DA - 2005// TI - Identification of genes affecting lycopene accumulation in Escherichia coli using a shot-gun method JO - Biotechnol Bioeng VL - 91 UR - https://doi.org/10.1002/bit.20539 DO - 10.1002/bit.20539 ID - Kang2005 ER - TY - JOUR AU - Farmer, W. R. AU - Liao, J. C. PY - 2001 DA - 2001// TI - Precursor balancing for metabolic engineering of lycopene production in Escherichia coli JO - Biotechnol Prog VL - 17 UR - https://doi.org/10.1021/bp000137t DO - 10.1021/bp000137t ID - Farmer2001 ER - TY - JOUR AU - Alper, H. AU - Miyaoku, K. AU - Stephanopoulos, G. PY - 2005 DA - 2005// TI - Construction of lycopene-overproducing E. coli strains by combining systematic and combinatorial gene knockout targets JO - Nat Biotechnol VL - 23 UR - https://doi.org/10.1038/nbt1083 DO - 10.1038/nbt1083 ID - Alper2005 ER - TY - JOUR AU - Zhao, J. AU - Li, Q. AU - Sun, T. AU - Zhu, X. AU - Xu, H. AU - Tang, J. PY - 2013 DA - 2013// TI - Engineering central metabolic modules of Escherichia coli for improving beta-carotene production JO - Metab Eng VL - 17 UR - https://doi.org/10.1016/j.ymben.2013.02.002 DO - 10.1016/j.ymben.2013.02.002 ID - Zhao2013 ER - TY - JOUR AU - Liu, H. AU - Sun, Y. AU - Ramos, K. R. AU - Nisola, G. M. AU - Valdehuesa, K. N. AU - Lee, W. K. PY - 2013 DA - 2013// TI - Combination of Entner–Doudoroff pathway with MEP increases isoprene production in engineered Escherichia coli JO - PLoS One VL - 8 UR - https://doi.org/10.1371/journal.pone.0083290 DO - 10.1371/journal.pone.0083290 ID - Liu2013 ER - TY - JOUR AU - Zhou, Y. AU - Nambou, K. AU - Wei, L. AU - Cao, J. AU - Imanaka, T. AU - Hua, Q. PY - 2013 DA - 2013// TI - Lycopene production in recombinant strains of Escherichia coli is improved by knockout of the central carbon metabolism gene coding for glucose-6-phosphate dehydrogenase JO - Biotechnol Lett VL - 35 UR - https://doi.org/10.1007/s10529-013-1317-0 DO - 10.1007/s10529-013-1317-0 ID - Zhou2013 ER - TY - JOUR AU - Liu, H. AU - Wang, Y. AU - Tang, Q. AU - Kong, W. AU - Chung, W. J. AU - Lu, T. PY - 2014 DA - 2014// TI - MEP Pathway-mediated isopentenol production in metabolically engineered Escherichia coli JO - Microb Cell Fact VL - 13 UR - https://doi.org/10.1186/s12934-014-0135-y DO - 10.1186/s12934-014-0135-y ID - Liu2014 ER - TY - JOUR AU - Kruger, N. J. AU - Schaewen, A. PY - 2003 DA - 2003// TI - The oxidative pentose phosphate pathway: structure and organisation JO - Curr Opin Plant Biol VL - 6 UR - https://doi.org/10.1016/S1369-5266(03)00039-6 DO - 10.1016/S1369-5266(03)00039-6 ID - Kruger2003 ER - TY - JOUR AU - Wang, Y. AU - San, K. Y. AU - Bennett, G. N. PY - 2013 DA - 2013// TI - Improvement of NADPH bioavailability in Escherichia coli through the use of phosphofructokinase deficient strains JO - Appl Microbiol Biotechnol VL - 97 UR - https://doi.org/10.1007/s00253-013-4859-0 DO - 10.1007/s00253-013-4859-0 ID - Wang2013 ER - TY - JOUR AU - Siedler, S. AU - Bringer, S. AU - Blank, L. M. AU - Bott, M. PY - 2012 DA - 2012// TI - Engineering yield and rate of reductive biotransformation in Escherichia coli by partial cyclization of the pentose phosphate pathway and PTS-independent glucose transport JO - Appl Microbiol Biotechnol VL - 93 UR - https://doi.org/10.1007/s00253-011-3626-3 DO - 10.1007/s00253-011-3626-3 ID - Siedler2012 ER - TY - JOUR AU - Ajikumar, P. K. AU - Xiao, W. H. AU - Tyo, K. E. AU - Wang, Y. AU - Simeon, F. AU - Leonard, E. PY - 2010 DA - 2010// TI - Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli JO - Science VL - 330 UR - https://doi.org/10.1126/science.1191652 DO - 10.1126/science.1191652 ID - Ajikumar2010 ER - TY - JOUR AU - Baba, T. AU - Ara, T. AU - Hasegawa, M. AU - Takai, Y. AU - Okumura, Y. AU - Baba, M. AU - Datsenko, K. A. PY - 2006 DA - 2006// TI - Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection JO - Mol Syst Biol VL - 2006 ID - Baba2006 ER - TY - BOOK AU - Green, M. R. AU - Sambrook, J. AU - Sambrook, J. PY - 2012 DA - 2012// TI - Molecular cloning : a laboratory manual PB - Cold Spring Harbor Laboratory Press CY - Cold Spring Harbor ID - Green2012 ER - TY - JOUR AU - Datsenko, K. A. AU - Wanner, B. L. PY - 2000 DA - 2000// TI - One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products JO - Proc Natl Acad Sci USA VL - 97 UR - https://doi.org/10.1073/pnas.120163297 DO - 10.1073/pnas.120163297 ID - Datsenko2000 ER - TY - STD TI - Thomason LC, Costantino N, Court DL (2007) E. coli genome manipulation by P1 transduction. Curr Protoc Mol Biol Chapter 1:1–17 ID - ref26 ER - TY - JOUR AU - Studier, F. W. PY - 2005 DA - 2005// TI - Protein production by auto-induction in high density shaking cultures JO - Protein Expr Purif VL - 41 UR - https://doi.org/10.1016/j.pep.2005.01.016 DO - 10.1016/j.pep.2005.01.016 ID - Studier2005 ER - TY - JOUR AU - Farasat, I. AU - Kushwaha, M. AU - Collens, J. AU - Easterbrook, M. AU - Guido, M. AU - Salis, H. M. PY - 2014 DA - 2014// TI - Efficient search, mapping, and optimization of multi-protein genetic systems in diverse bacteria JO - Mol Syst Biol VL - 10 UR - https://doi.org/10.15252/msb.20134955 DO - 10.15252/msb.20134955 ID - Farasat2014 ER -