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Table 4 Strains and plasmids used in this study

From: Engineering of Serine-Deamination pathway, Entner-Doudoroff pathway and pyruvate dehydrogenase complex to improve poly(3-hydroxybutyrate) production in Escherichia coli

Strain or plasmid

Relevant genotype b

Source or reference

Strains

  

E. coli DH5α

Coli Genetic Stock Center strain (CGSC) No. 12384

CGSCa

E. coli JM109

recA1, endA1, gyrA96, thi, hsdR17, supE44, relA1, Δ(lac proAB)/F’ [traD36, proAB +, lac q lacZΔM15]

TaKaRa (Dalian, China)

SD01

SD01, P sdaA ::Ptrc

This study

SD02

SD02, SerC:: Ptrc-pgk-SerABC

This study

SD03

SD02, P edd ::P J23119

This study

SD04

SD02, P edd-eda ::P J23119 , P zwf ::PTrc-162

 

SD06

SD02, P aceE ::PTrc-162

This study

SD07

SD04, P aceE ::PTrc-162

This study

Tet-Trc-162

JM109, tetA-trc-M1-162-glyA

Lab collection

Plasmids

  

pTrc101

Expression vector, pSC101 replication, constitutive trc promoter, Cmr

This study

pTSer

pSC101 replication, Cmr, Ptrc -serA-serB-serC

This study

pTPSer

pSC101 replication, Cmr, P trc - pgk-serA-serB-serC

This study

pTPgk

pSC101 replication, Cmr, Ptrc-pgk

This study

pBHR68

pBluscript SK(-) derivative, phbA Re , phbB Re , phbC Re cloned from R. eutropha

[34]

pTKRED

pSC101 replication, temperature sensitive replication origin, Spc r, P araBAD -driven I-SceI gene, Red recombinase expression plasmid, lac-inducible expression

[35]

pTKS/CS

p15A replication, Cm r, Tet r, I-SceI restriction sites

[35]

  1. aColi Genetic Stock Center.
  2. b Abbreviations: Amp ampicillin, Cm chloramphenicol, Tet tetracycline, Spc spectinomycin, r resistance.