Table 4 Results of analysis of DNA sequence of the insert in clone 129–3
From: The use of fosmid metagenomic libraries in preliminary screening for various biological activities
ORF position in the clone | Putative gene | Significant similarity (%) to known gene from indicated organism | Description |
|---|---|---|---|
1885-3162 | thrC | 73% Starkeya novella DSM 506 | COG0498 Threonine synthase [amino acid transport and metabolism] |
4778-5017 | rimL | 70% Polymorphum gilvum SL003B-26A1 | COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins [Ttanslation, ribosomal structure and biogenesis] |
10222-8198 | phaS | 74% Polymorphum gilvum SL003B-26A1 | TIGR01838 poly (R)-hydroxyalkanoic acid synthase, class I [fatty acid and phospholipid metabolism, Biosynthesis] |
11838-13154 | homD | 69% Polymorphum gilvum SL003B-26A1 | PRK06349 Homoserine dehydrogenase [synthesis of Met, Thr, Ile from Asp] |
19761-21452 | arnT | 78% Starkeya novella DSM 506 | COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [amino acids and vitamins transport] |
22371-22703 | lpxB | 76% Mesorhizobium loti MAFF303099 | PRK01021 lipid-A-disaccharide synthase |
23930-22725 | metC | 65% Starkeya novella DSM 506 | PRK05967 cystathionine beta-lyase [methionine and cysteine metabolism] |
24090-25163 | hisJ | 67% Starkeya novella DSM 506 | COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [amino acid transport and metabolism/signal transduction mechanisms] |
29290-27989 | cfaS | 70% Mesorhizobium opportunistum WSM2075 | COG2230 Cyclopropane fatty acid synthase and related methyltransferases [cell envelope biogenesis, outer membrane] |