Sequencing Data: | Â |
---|---|
Total DNA bases after Roche GS FLX | 9,408,251 |
Average coverage Roche GS FLX | 22 |
Total DNA bases after Illumina GA | 9,405,451 |
Average coverage Illumina GA | 60 |
Number of reads Roche FLX | 562,515 |
Number of reads Illumina GA | 15,761,520 |
Number of contigs | 326 |
Contigs > 1 kbp | 153 |
Largest contig | 419,475 |
Smallest contig | 128 |
Average contig size | 28,906 |
GC content | 41.34% |
Gene Prediction Data: | Â |
Predicted ORFs | 7,935 |
Manually curated number of ORFs | 5,450 |
Thereof ORFs with introns | 741 |
Truncated ORFs | 194 |
ORFs with annotation | 4,257 |
GC content coding regions | 41.90% |
RNA Prediction Data: | Â |
tRNA genes | 149 |
5S rRNA | 14 |
rRNA cluster (18S, 26S, 5.8S rRNA) | 1 |