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Table 2 Oligonucleotides used in RT real-time PCR experiments

From: Phenotypes and gene expression profiles of Saccharopolyspora erythraea rifampicin-resistant (rif) mutants affected in erythromycin production

Name

Sequence

Target gene

Amplicon length

(bp)

16Suniv-1

5'-CAGCAGCCGCGGTAATAC-3'

16S rRNA

409

16Suniv-2

5'-CCGTCAATTCCTTTGAGTTT-3'

  

SACE1456 for

5'-GCGGCTGGCCGAGCTGTTCATC-3'

SACE1456

172

SACE1456 rev

5'-GTGGGCGGCGGCCGTCGAGTAG-3'

  

SACE1457 for

5'-GATGTCTACGTCGTGATGGCCAG-3'

SACE1457

184

SACE1457 rev

5'-CGAGCCGGTGCGTGGCGGGCAC-3'

  

SACE1458 for

5'-GCTTTGCGCGGGCGGCGACATCC-3'

SACE1458

186

SACE1458 rev

5'-CCGTGCGCGGTGACACCGACG-3'

  

SACE1459 for

5'-CGGCCAGGTCACCAAGATGTGC-3'

SACE1459

167

SACE1459 rev

5'-CCGGGCAGTTGGTGGTCAGCG-3'

  

SACE0636 for

5'-CAACCCGACCCGCCCGCACAC-3'

SACE0636

107

SACE0636 rev

5'-CGGCGAAGGCGAGGTCCAC-3'

  

SACE1684 for

5'-CCTCCCGTTCACGATCATCC-3'

SACE1684

140

SACE1684 rev

5'-GCCCCAGCACGAAGACCGTTC-3'

  

SACE3802 for

5'-AGCCTCGGCCGCGGCCACGTCC-3'

SACE3802

102

SACE3802 rev

5'-CACCGAGTACGTGCCGTTGCGC-3'

  

SACE6038 for

5'-GGCCTACGACTTCGTCAAG-3'

SACE6038

125

SACE6038 rev

5'-GGTTGACGAAGGGCATGC-3'

  

SACE6062 for

5'-GTCGTGGGCGTGCTCTGG-3'

SACE6062

109

SACE6062 rev

5'-CCTGTCCGAGCCCGAAGAAC-3'

  

SACE6280 for

5'-CAAGGCGCCGTCCTTCGACCAG-3'

SACE6280

112

SACE6280 rev

5'-GAACAGACCGATCTTGCCGCC-3'

  

SACE6818 for

5'-GCACAAGGGTCTGGTCGG-3'

SACE6818

116

SACE6818 rev

5'-CCAGGCCACGCACGTCAGG-3'

  

SACE6899 for

5'-GGGCGAGACGATCGTCAAGGCCC-3'

SACE6899

133

SACE6899 rev

5'-GTGCAGCGGCGCGAGGTAGTCC-3'

  

SACE6902 for

5'-GTCCCGCTGGTGCTGATG-3'

SACE6902

100

SACE6902 rev

5'-CGTTGGCGCGGTTGTACC-3'

  

SACE7101 for

5'-AGGAGGTCTGGGGCTACGACTTCTTCG-3'

SACE7101

110

SACE7101 rev

5'-CACGGTGCCGATGGAGTCGTAC-3'

  

bldD for

5'-GGCCGAGAAGGTGGGCCCGCTG-3'

bldD

136

bldD rev

5'-CCGGGCGTCATGTCGTAGATG-3'

  

eryCII for

5'-GACCCTTACCCGATGCTGCTG-3'

eryCII

156

eryCII rev

5'-GGTGAACGCGGGGTCGTCGAG-3'

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