Gene | Primer | Primer sequence |
---|---|---|
Aromatic amino acid pathways | ||
aroF | aroFa | 5' CAGAATCCGTGGTTGCTCAA 3' |
 | aroFb | 5' CGGTTGCTCGGAAGACTGAT 3' |
aroG | aroGa | 5' GTCGGCTTCAAAAATGGCAC 3' |
 | aroGb | 5' CCCCATTTCGTTACGGACAG 3' |
aroH | aroHa | 5' CTGCTCGATCCACGATCTCA 3' |
 | aroHb | 5' AGGTGCGCATTACGATTTCC 3' |
aroB | aroBa | 5' GTTATCCTCCCTGACGGCG 3' |
 | aroBb | 5' ACCAGCGTAGTATCGCGACC 3' |
aroD | aroDa | 5' AGCCGAAGAAATCATTGCCC 3' |
 | aroDb | 5' ACGTCAGCACATCGCTGGTA 3' |
aroE | aroEa | 5' AATCCGATAGCCCACAGCAA 3' |
 | aroEb | 5' TCATTGATGGGTGCCAACAC 3' |
ydiB | ydiBa | 5' AAAAGCGGGATTGCCATTTA 3' |
 | ydiBb | 5' CAGTTCCGCGCATTTTGAG 3' |
aroL | aroLa | 5' CCGGAAGAAGATTTACGGCC 3' |
 | aroLb | 5' TGCGCAACTTCGCGATATAG 3' |
aroK | aroKa | 5' GCACTATTGGGCGCCAGTTA 3' |
 | aroKb | 5' GAAAACCCAGCCCACATCAG 3' |
aroM | aroMa | 5' CCAGAAGCAGGCGAAGACAC 3' |
 | aroMb | 5' TCAACCACACCTTGCAGGTC 3' |
aroA | aroAa | 5' CATATTCCTGATGCGGCGAT 3' |
 | aroAb | 5' TCGGTCTCTTTAACACGCCAG 3' |
aroC | aroCa | 5' GGGACATCGCGCTATACCAC 3' |
 | aroCb | 5' AACAAGCCAATGCTGGTGC 3' |
pheA | pheARa | 5' ATGACCCGTCTGGAATCACG 3' |
 | pheARb | 5' GCTTTTTGCATTTCCGCTG 3' |
pheA-ev2 | pheAa | 5' ACTCAGCAGGCTTTGCTCCA 3' |
 | pheAb | 5' GCCGCAAGATGGGAATAAGAA 3' |
tyrA | tyrAa | 5' GTCAGATGGGACGCCTGTTC 3' |
 | tyrAb | 5' GGCAACAATATCAGCCGCTC 3' |
aspC | aspCa | 5' GGCGATTCGCGCTAACTACT 3' |
 | aspCb | 5' GCTCTTGTTCCCAAATCGCA 3' |
trpE | trpEa | 5' CGCAACTGTCAGCGGAAAAT 3' |
 | trpEb | 5' GGCCTGAATACGGGTGCTTT 3' |
trpA | trpAa | 5' CGTTCCTTTCGTCACGCTC 3' |
 | trpAb | 5' CGTTCCTTTCGTCACGCTC 3' |
Aromatic amino acid transport | ||
pheP | phePa | 5' CGGCTGTATTGCTGGGCTAC 3' |
 | phePb | 5' AAATGAACCGGATACCGGCT 3' |
aroP | aroPa | 5' TGGTAATCAACTGGGCGATG 3' |
 | aroPb | 5' CGGATAAAGCAGAGCAGGGA 3' |
tyrP | tyrPa | 5' CCGGTGTTGGTTTTAGCGTT 3' |
 | tyrPb | 5' CGGAACATGCTGGTACACCTC 3' |
mtr | mtra | 5' TTGATGTGCTGGTACAGGCG 3' |
 | mtrb | 5' GAGGAACGAACTCGCTACCG 3' |
shiA | shiAb | 5' ATTATCAAGCTGCCGCGAAA 3' |
 | shiAb | 5' CAATTCGCACAGTCGTAGCG 3' |
ilvE | ilvEa | 5' AAGGCATCCGTTGCTACGAC 3' |
 | ilvEb | 5' CGGGAAGCGATAGATTTTGG 3' |
aroP | aroPa | 5' TGGTAATCAACTGGGCGATG 3' |
 | aroPb | 5' CGGATAAAGCAGAGCAGGGA 3' |
Regulators | ||
trpR | trpRa | 5' CAGAACAGCGTCACCAGGAG 3' |
 | trpRb | 5' TGGCGTCAGCATCAGGTTTA 3' |
tyrR | tyrRa | 5' GGCGAGCTGTCAGCTTTTTG 3' |
 | tyrRb | 5' CGCTTTCCAGCCAACGTAAA 3' |
csrA | csrAa | 5' TCTGACTCGTCGAGTTGGTGA 3' |
 | csrAb | 5' GGGCATTTACGCCAATACGT 3' |
rpoD | rpoDa | 5' GATTCTGCGACCACCGAAAG 3' |
 | rpoDb | 5' TCGATACCGAAACGCATACG 3' |
rpoE | rpoEa | 5' GAACTATTGAGTCCCTCCCGG 3' |
 | rpoEb | 5' CGGACAATCCATGATAGCGG 3' |
fnr | fnra | 5' CGGAAAAGCGAATTATACGGC 3' |
 | fnrb | 5' TTCGTTGAGTGTGAACGGGA 3' |
Carbohydrate transport | ||
malE | malEa | 5' AGAAATTCCCACAGGTTGCG 3' |
 | malEb | 5' TTCAGCCAACAGGCCAGATT 3' |