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Table 1 Summary of the experimental results

From: Increased 3-hydroxypropionic acid production from glycerol, by modification of central metabolism in Escherichia coli

 

TK52

TK52z

TK52t

TK52tz

TK52tzy

Simulation*4

iAF1260-3HP

Simulation*4

ΔtpiA Δzwf

Specific growth rate (1/h)*1

0.73 ± 0.00

0.71 ± 0.00

1st: 0.55 ± 0.01

1st: 0.54 ± 0.01

1st: 0.56 ± 0.01

  

2nd: 0.03 ± 0.01

2nd: 0.03 ± 0.00

2nd: 0.04 ± 0.01

Maximum 3HP production rate (mmol/(g DCh))*2

0.08 ± 0.02

0.09 ± 0.01

0.22 ± 0.14

0.27 ± 0.11

0.94 ± 0.05

  

Consumed glycerol (mM)*3

192.7 ± 5.0

193.2 ± 2.4

168.2 ± 24.4

119.0 ± 44.6

117.6 ± 3.9

  

Biomass (C-mol%)*3

37.0 ± 3.5

36.1 ± 1.4

19.6 ± 3.2

21.7 ± 11.0

20.8 ± 1.2

47.7

22.8

 

(5.2 ± 0.5)

(5.1 ± 0.2)

(2.4 ± 0.6)

(1.6 ± 0.3)

(1.8 ± 0.1)

  

3HP (C-mol%)*3

4.6 ± 0.8

5.7 ± 0.6

14.7 ± 7.0

20.1 ± 9.2

33.9 ± 1.2

0

70.5

 

(8.9 ± 1.3)

(11.1 ± 1.0)

(24.3 ± 11.7)

(21.2 ± 7.7)

(39.9 ± 2.4)

  

1,3-PDO (C-mol%)*3

0.8 ± 0.4

0.7 ± 0.2

22.9 ± 5.2

37.7 ± 13.2

5.9 ± 0.5

0

0

 

(1.5 ± 0.8)

(1.3 ± 0.3)

(38.1 ± 9.4)

(40.5 ± 14.0)

(7.0 ± 0.7)

  

Succinate (C-mol%)*3

0.9 ± 0.1

1.3 ± 0.2

0.3 ± 0.3

0

0

0

0

 

(1.3 ± 0.2)

(1.9 ± 0.2)

(0.4 ± 0.3)

(0)

(0)

  

Acetate (C-mol%)*3

9.9 ± 1.8

12.9 ± 0.2

8.2 ± 9.9

2.2 ± 4.1

6.6 ± 1.9

27.4

0

 

(28.7 ± 5.4)

(37.3 ± 1.1)

(20.5 ± 24.3)

(5.1 ± 9.6)

(11.6 ± 3.0)

  

Maximum methylglyoxal concentration (mM)

0.03 ± 0.02

0.03 ± 0.02

0.29 ± 0.02

0.22 ± 0.02

0.60 ± 0.02

  
  1. *1Specific growth rates were calculated using OD600 at 0–6 h for the TK52 and TK52z strains. For the TK52t, TK52tz and TK52tzy strains, specific growth rates during the 1st and 2nd growth phases were calculated using the OD600 at 0–6 h and 48–72 h, respectively.
  2. *2Maximum 3HP production rates were calculated from the data at 24–48 h for the TK52 and TK52z strains, and at 48–72 h for other strains.
  3. *3C-mol% was calculated from the carbon-mol of the product per carbon-mol of the consumed glycerol. The values in the parentheses indicate the final concentrations of biomass (g/L) and products (mM). Standard deviations were obtained from triplicate experiments in the TK52 and TK52z strains, and from 9 replicate experiments in other strains. For calculation of biomass yield, OD600 was converted into dry cell weight using the conversion factor 0.37 g DC/L, and carbon-mol in the biomass was calculated based on the biomass composition described in the iAF1260 model [21].
  4. *4Metabolic simulation was performed with following parameters: GUR was 15 mmol/(g DCh) and OUR was 10 mmol/(g DCh).