Reaction ID | Enzyme name (Gene) | Reaction details | Complex media | Minimal media |
---|---|---|---|---|
 |  |  | (LB < L < UB) | (LB < L < UB) |
R192 | Alanine dehydrogenase ( ald ) | H[c] + NADH[c] + PYR[c] + NH4[c] < = > L_ALA[c] + NAD[c] + H2O[c] | -0.031 < -0.031 < -0.031 | 0.234 < 0.234 < 2.416 |
R521 | Asparagine synthase (asnB) | L_ASP[c] + L_GLN[c] + ATP[c] + H2O[c] < = > L_GLU[c] + L_ASN[c] + PPi[c] + H[c] + AMP[c] | -1.808 < -1.808 < -1.783 | -0.537 < -0.537 < -0.522 |
R198 | Aspartate aminotransferase (aspC) | L_ASP[c] + AKG[c] < = > L_GLU[c] + OAC[c] | -1.782 < -1.782 < -1.782 | -0.416 < -0.416 < -0.416 |
R205 | Glutamine synthetase (gln) | L_GLU[c] + ATP[c] + NH4[c] - > L_GLN[c] + ADP[c] + Pi[c] + H[c] | -1.793 < -1.793 < -1.793 | -0.474 < -0.474 < -0.474 |
R202 | Glutamate dehydrogenase (gdh) | L_GLU[c] + NADP[c] + H2O[c] < = > H[c] + NADPH[c] + AKG[c] + NH4[c] | -9.830 < -9.145 < 4.713 | -9.288 < -8.813 < 2.977 |
R227 | Cysteine synthase ( cysM ) | OAC_SER[c] + H2S[c] - > L_CYS[c] + H[c] + AC[c] | 0 < 0 < 0 | 0 < 0.005 < 0.005 |
R235 | Methionine synthase ( metH ) | L_HCYS[c] + 5MTHF[c] - > L_MET[c] + H[c] + THF[c] | 0 < 0 < 0 | 0 < 0.009 < 0.009 |
R272 | N2-acetyl-L-lysine deacetylase (lysK) | H2O[c] + N2AC_L_LYS[c] - > L_LYS[c] + AC[c] | 0.229 < 0.229 < 0.229 | 0.05 < 0.05 < 0.05 |
R651 | 3-phosphoserine phosphatase (serB) | H2O[c] + PPTD_SER[c] - > L_SER[c] + Pi[c] | 0 < 0 < 0 | 0 < 1.072 < 2.545 |
R655 | Serine hydroxymethyltransferase (glyA) | L_SER[c] + THF[c] - > L_GLY[c] + H2O[c] + METHF[c] | 0 < 0 < 0 | 0 < 0.512 < 6.42 |
R213 | Serine hydroxymethyltransferase (glyA) | L_GLY[c] + H2O[c] + 5_10_MNTHF[c] < = > L_SER[c] + THF[c] | 0.135 < 0.135 < 0.135 | -1.787 < -0.442 < 3.993 |
R212 | Tryptophan synthase (trpA) | L_SER[c] + IND_GLYP[c] < = > L_TRP[c] + H2O[c] + GAP[c] | 0.054 < 0.054 < 0.054 | 0.026 < 0.026 < 0.026 |
R221 | Threonine synthase (thrC) | H2O[c] + OP_HSER[c] - > L_THR[c] + Pi[c] | 0.0714 < 0.0714 < 0.0714 | 0.063 < 0.063 < 0.063 |
R245 | Branched-chain amino acid aminotransferase ( ilvE ) | L_VAL[c] + AKG[c] < = > L_GLU[c] + 2K3M_BUT[c] | 0.113 < 0.113 < 0.113 | -0.068 < -0.068 < -0.068 |
R244 | Branched-chain amino acid aminotransferase ( ilvE ) | L_GLU[c] + 4M_2OPENTN[c] < = > L_LEU[c] + AKG[c] | -1.179 < -1.179 < -1.179 | 0.154 < 0.154 < 0.154 |
R246 | Branched-chain amino acid aminotransferase ( ilvE ) | L_ILE[c] + AKG[c] < = > L_GLU[c] + 3M_2OPENTN[c] | 0.478 < 0.478 < 0.478 | -0.024 < -0.024 < -0.024 |
R341 | Pyrroline-5-carboxylate reductase (ProC) | L_PRO[c] + NADP[c] < = > 2 H[c] + NADPH[c] + PYRR5CARB[c] | -0.432 < -0.432 < -0.432 | -0.119 < -0.119 < -0.119 |
R195 | Argininosuccinate lyase (argH) | L_ARG_SUCC[c] - > L_ARG[c] + FUM[c] | 1.144 < 1.144 < 1.144 | 0.132 < 0.132 < 0.132 |
R297 | Aspartate aminotransferase ( aat ) | L_PHE[c] + AKG[c] < = > L_GLU[c] + PPYR[c] | 0 < 0 < 0 | -0.054 < -0.054 < -0.054 |
R284 | Histidinol dehydrogenase (hisD) | 2 NAD[c] + H2O[c] + L_HISN[c] - > L_HIS[c] + 3 H[c] + 2 NADH[c] | 0.025 < 0.025 < 0.025 | 0.015 < 0.015 < 0.015 |