Table 2 Distribution of prtS loci among LMG18311, DGCC7666 and DGCC7891 genomes
Strains | Putative insertion sites and their surrounding genes | prtS insertion number | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | IS Sth1 orf1/2 | IS 1167 | Â | |||||||||||
| Â | ciaH | blpT | galU | msrA1 | topA | STND0510 | stu0861 | stu1089 | STND0227 | STND0823 | STND0900 | STND1130 | STND1212 | Â |
| Â | rpsT | stu1680 | stu1836 | brnQ | stu0900 | STND0513 | stu0868 | stu1075 | STND0229 | STND-0825 | STND0902 | STND1132 | STND1214 | Â |
DGCC7666 PrtS+ | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
CL1 | - | + | - | + | / | / | - | + | / | / | / | / | / | 3 |
CL2 | + | + | - | - | / | / | + | + | / | / | / | / | / | 4 |
CL3 | + | - | - | + | / | / | - | - | / | / | / | / | / | 2 |
CL4 | - | - | + | - | / | / | - | - | / | / | / | / | / | 1 |
CL6 | - | - | - | + | / | / | - | - | / | / | / | / | / | 1 |
LMG18311 PrtS+ | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
CL3A | - | + | - | + | - | / | - | - | / | / | / | / | / | 2 |
CL6A, 10A | + | - | - | - | - | / | - | - | / | / | / | / | / | 1 |
CL9A, 17A | - | - | - | + | - | / | - | - | / | / | / | / | / | 1 |
CL21A, 23A | - | - | + | - | - | / | - | - | / | / | / | / | / | 1 |
DGCC7891 PrtS+ | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
CL1A, 19A | + | + | + | / | / | - | / | / | + | + | + | - | + | 7 |
CL1B | + | + | + | / | / | - | / | / | + | + | - | - | + | 6 |