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Table 2 Genetic features of the major pilin protein in bifidobacteria.

From: Genetic analysis and morphological identification of pilus-like structures in members of the genus Bifidobacterium

Strain

Major pilin protein

 

ORF

CWSS

Pilin motif

E box

B. bifidum PRL2010

283

LP KTG A

GDSTAEV DMK

YTVTET AVADG Y

B. bifidum PRL2010

1707

LP LTG G

VYSSGSIDMK

YTIEEI AAPNG Y

B. bifidum PRL2010

1821

LP GTG G

HSTTVGV DIK

YTLTET EAPAG Y

B.dentium Bd1

144

LP LTG A

NHGDNTV NMK

YTVSET KVATG Q

B.dentium Bd1

200

LP LTG G

QTLSYNV TAK

YTVKET KAPAG Y

B.dentium Bd1

277

LP ETG G

VAGNV TITPK

YVLTET KTPAG Y

B.dentium Bd1

535

LP LTG A

GQTLGVV NVK

YDVVET DAPAG Y

B.dentium Bd1

1875

LP ITG A

HPAQTIDVKK

YTVTET VVPAG F

B.dentium Bd1

2190

LP STG G

FEKINSV KVK

YVLSET KTPEG Y

B.dentium Bd1

1999

LP LTG A

PLTLGTV VAK

YTVKET ATREDL

B. longum subsp. longum NCC2705

675

LP DTG G

KSEYPTV DKT

YYLKET FAPKG Y

B. longum subsp. longum DJ010A

1468

LP GTG G

KGSLPTV DKK

YTLTET KAPAG Y

B. adolescentis ATCC 15703

1463

LP LTG A

INAVGMFVAK

YTLKET GFASG Y

B. animalis subsp. lactis DSM10140

1484

LP LTG A

KPSGTITLGK

YKVTET DVLSRY

A. naeslundii T14V

FimP

LP LTG A

WNYNVHV YPK

YCLVET KAPEG Y

A. naeslundii T14V

FimA

LP LTG A

WIYDVHV YPK

YVLVET KAPAG Y

Consensus sequences

 

LP xTG

xxxxxTVxxK

YxxxET xAPxG Y