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Table 2 The intervals lengths between the co-linear phaP and phaC1 genes from Halomonas sp. TD01 and their homologues in other microorganisms

From: Comparative genomics study of polyhydroxyalkanoates (PHA) and ectoine relevant genes from Halomonas sp. TD01 revealed extensive horizontal gene transfer events and co-evolutionary relationships

Order

Family

Species

Interval (bp)

Oceanospirillales

Halomonadaceae

Halomonas sp.TD01

92

  

Halomonas elongata DSM 2581

82

  

Chromohalobacter salexigens DSM 3043

204

 

Oceanospirillaceae

Marinomonas sp. MED121

92

 

Hahellaceae

Hahella chejuensis KCTC 2396

134

Vibrionales

Vibrionaceae

Vibrio alginolyticus 12G01

66

  

Vibrio brasiliensis LMG 20546

55

  

Vibrio caribbenthicus ATCC BAA-2122

57

  

Vibrio cholerae 1587

57

  

Vibrio coralliilyticus ATCC BAA-450

58

  

Vibrio furnissii CIP 102972

56

  

Vibrio harveyi 1DA3

66

  

Vibrio metschnikovii CIP 69.14

116

  

Vibrio mimicus VM573

57

  

Vibrio orientalis CIP 102891

57

  

Vibrio parahaemolyticus RIMD 2210633

66

  

Vibrio shilonii AK1

79

  

Vibrio sinaloensis DSM 21326

58

  

Vibrio sp. Ex25

80

  

Vibrio sp. RC586

57

  

Vibrio splendidus LGP32

73

  

Vibrio vulnificus CMCP6

61

  

Vibrionales bacterium SWAT-3

75

  

Grimontia hollisae CIP 101886

63

  

Photobacterium angustum S14

211

  

Photobacterium damselae subsp. damselae CIP 102761

59

  

Photobacterium leiognathi subsp. mandapamensis svers.1.1.

119

  

Photobacterium profundum 3TCK

179

  

Photobacterium profundum SS9

65

  

Photobacterium sp. SKA34

121

Pseudomonadales

Moraxellaceae

Enhydrobacter aerosaccus SK60

199

Alteromonadales

Shewanellaceae

Shewanella halifaxensis HAW-EB4

94

  

Shewanella pealeana ATCC 700345

95

 

Alteromonadaceae

Marinobacter aquaeolei VT8

74

  

Marinobacter sp. ELB17

118

Aeromonadales

Aeromonadaceae

Aeromonas caviae

92

  

Aeromonas hydrophila

92

  

Aeromonas hydrophila subsp. hydrophila ATCC 7966

93

  

Aeromonas salmonicid a subsp. salmonicida A449

93