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Table 1 Oligonucleotide primers used in this study

From: Quantitative transcript analysis of the inducible expression system pSIP: comparison of the overexpression of Lactobacillus spp. β-galactosidases in Lactobacillus plantarum

Primer

Sequence 5' - 3'a

Tab(°C)

Concentrationc(nM)

Product size (bp)

Tm product (°C)

16S_f

TGATCCTGGCTCAGGACGAA

60

250

81

81

16S_r

TGCAAGCACCAATCAATACCA

 

250

  

EryR_f

CCGTGCGTCTGACATCTAT

60

250

108

79

EryR_r

TGCTGAATCGAGACTTGAGTG

 

250

  

LacReu_f

CCA GAT TCC GTG GTA TTA CCT TTG TG

60

250

154

80

LacReu_r

TAC TACT ACG TCA CGC CAT TGA GGA AC

 

500

  

LacAci_f

TCTAGTTCACTACGAAGGTGTCG

60

500

154

76.5

LacAci_r

GTCATGCATGTATTCACACTCC

 

500

  

SppKR_f

CAAGCCGTTCAAGAAACCGAT

60

250

144

78.5

SppKR_r

AGCGCCTTTCGTTGAATAGCC

 

500

  

11n15_f

GATGACCCG GAAATTTTTCGC GTCAATCAATTGCCAGC

   

11n15_r

GACGCG AAAAATTTCCGG GTCATC

    
  1. a exchanged codons in 11n15_f and 11n15_r are underlined
  2. b optimized annealing temperature as described in the Materials Section
  3. coptimized concentration as described in the Materials Section