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Table 1 Bacterial strains and plasmids

From: Engineering of a plasmid-free Escherichia coli strain for improved in vivo biosynthesis of astaxanthin

Strains

Relevant genotype or sequences

Source

E. coli DH5α

F-, ϕ80d, lacZ ΔM15, endA 1, recA 1, hsdR 17(rK-mK-), supE 44, thi-1, gyrA 96, relA 1, Δ(lacZYA-argF)U169

laboratory strain

E. coli BW-CARO

E. coli BW25113, malEG::crtE, fucIK::crtB,

xylAB::crtI, lacZA::crtY

[24]

E. coli BW-CAROdxs

E. coli BW25113, malEG::crtE, fucIK::crtB,

xylAB::crtI, lacZA::crtY, PT5-dxs

this study

E. coli BW-CAROdxs-idi

E. coli BW25113, malEG::crtE, fucIK::crtB,

xylAB::crtI, lacZYA::crtY, PT5-dxs, galEM::idi

this study

E. coli BW-CANT

E. coli BW25113, malEG::crtE, fucIK::crtB,

xylAB::crtI, lacZA::crtY, PT5-dxs, galEM::idi, melAB::crtW148

this study

E. coli BW-ASTA

E. coli BW25113, malEG:: Ptac-crtE, fucIK:: Ptac-crtB,

xylAB:: Ptac-crtI, lacZA:: Ptac-crtY, PT5-dxs, galEM:: Ptac-idi, melAB:: Ptac-crtW148, rbsDK:: Prha-crtZ

this study

Plasmids

  

pKD46

ParaB γ β exo (red recombinase), AmpR

[29]

pPQE32-148

pPQE32, N. punctiforme PCC 73102 crtW148148 gene, AmpR

[20]

pJF119ΔN

cloning vector, RBS, Ptac, AmpR

[26]

pCAS1

pET11a, P. putida KT2440 hpd gene, AmpR,

[26]

pJF119-idi

pJF119ΔN, E. coli idi gene, AmpR

this study

pJF119-idi-FRT-cat-FRT

pJF119ΔN, E. coli idi gene, FRT-sites, AmpR, CmR

this study

pQE31

cloning vector, RBS, PT5, AmpR

Qiagen, Germany

pCAS30-FRT-cat-FRT

pJF119ΔN, P. ananatis crtE gene, FRT-sites, AmpR, CmR

[27]

pJF119-crtW148

pJF119ΔN, N. punctiforme crtW148 gene, AmpR,

this study

pJF119-crtW148-FRT-cat-FRT

pJF119ΔN, N. punctiforme crtW148 gene, FRT-sites, AmpR, CmR

this study

pAW-crtZ

pAW223, P. ananatis crtZ gene, AmpR

this study

pAW-crtZ-FRT-cat-FRT

pAW223, P. ananatis crtZ gene, FRT-sites, AmpR, CmR

this study