Clone | Gene | Gene Description | Biological Process | Cellular Location | Genomic Coordinate | Nucleotide Change | Protein Change |
---|---|---|---|---|---|---|---|
G3.2/G3.6 | phoQ | sensory histidine kinase in two-component regulatory system with PhoP | Signal transduction | Inner membrane | 1197581 | A→G | L209P |
 | acrB | multidrug efflux system protein | Transport | Inner and outer membrane | 480665 | G→A | P988L |
 | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-) | Translation | Cytoplasm | 425270 | A→G | N346D |
 | secA | preprotein translocase subunit, ATPase | Protein secretion | Inner membrane | 108975 | T→C | S233P |
 | cadA | lysine decarboxylase 1 (EC:4.1.1.18) | Amino acid metabolism | Cytoplasm | 4363790 | A→G | I686T |
 | groL | Cpn60 chaperonin GroEL, large subunit of GroESL | Protein folding | Cytoplasm | 4378650 | A→C | K132N |
 | mutL | methyl-directed mismatch repair protein | Mismatch repair | Cytoplasm | 4405650 | -19 bp | Frameshift |
 | pstC | phosphate transporter subunit | Transport | Inner membrane | 3917582 | T→C | D16G |
 | rph | defective ribonuclease PH | RNA processing | Cytoplasm | 3823229 | +4:GGTC | Frameshift |
 | yiaK | 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent (EC:1.1.1.-) | Carbohydrate metabolism | Cytoplasm | 3750540 | T→C | L193P |
 | gltD | glutamate synthase, 4Fe-4S protein, small subunit (EC:1.4.1.13) | Amino acid, Nitrogen metabolism | Cytoplasm | 3367270 | +1:G | Frameshift |
 | mdh | malate dehydrogenase, NAD(P)-binding (EC:1.1.1.37) | Tricarboxylic acid cycle | Membrane peripheral | 3390726 | -1:C | Frameshift |
 | nlpI | lipoprotein involved in cell division | Cell cycle | Inner membrane | 3316213 | T→C | Non-coding region; Possible effect on terminator before nlpI |
 | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine | Nitrogen metabolism | Cytoplasm | 3205272 | IS186 insertion | Disruption |
 | hybB | predicted hydrogenase 2 cytochrome b type component | Electron transport chain | Inner membrane | 3150318 | A→G | V359A |
 | gatZ | D-tagatose 1,6-bisphosphate aldolase 2, subunit (EC:4.1.2.40) | Carbohydrate metabolism | Cytoplasm | 2182915 | -1:C | Frameshift |
 | yeeE | predicted inner membrane protein | - | Inner membrane | 2092513 | A→G | S333P |
 | lepB | leader peptidase (signal peptidase I) (EC:3.4.21.89) | Transport | Inner membrane | 2711902 | G→A | P213S |
 | hfq | HF-I, host factor for RNA phage Q β replication | Translation | Cytoplasm | 4407505 | -7:AGGAAAA | Non-coding region; Ribosome binding site deletion |
 | marC | conserved protein; predicted transporter | - | Inner membrane | 1625925 | IS1 insertion | Disruption |
G3.266.7 | groL | Cpn60 chaperonin GroEL, large subunit of GroESL | Protein folding | Cytoplasm | 4378650 | A→C | K132N |
 | rph | defective ribonuclease PH | RNA processing | Cytoplasm | 3823229 | +4:GGTC | Frameshift |
 | gltB-yhcE | - | - | - | - | -9.9 kb | ΔgltBDF, ΔyhcADE |
 | mdh | malate dehydrogenase, NAD(P)-binding (EC:1.1.1.37) | Tricarboxylic acid cycle | Membrane peripheral | 3390726 | -1:C | Frameshift |
 | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine | Nitrogen metabolism | Cytoplasm | 3205272 | IS186 insertion | Disruption |
 | hfq | HF-I, host factor for RNA phage Q β replication | Translation | Cytoplasm | 4407505 | -7:AGGAAAA | Non-coding region; Ribosome binding site deletion |
 | ycfK | e14 prophage; predicted protein | - | - | 1216432 | -1688 bp | ΔycfK |
 | marC | conserved protein; predicted transporter | - | Inner membrane | 1625925 | IS1 insertion | Disruption |
X3.5 | acrA | multidrug efflux system protein | Transport | Inner and outer membrane | 483735 | +1:A | Frameshift |
 | rpsB | 30S ribosomal subunit protein S2 | Translation | Cytoplasm | 190557 | +1:A | Frameshift |
 | rph | defective ribonuclease PH | RNA processing | Cytoplasm |  | -1:C | Frameshift |
 | mdh | malate dehydrogenase, NAD(P)-binding (EC:1.1.1.37) | Tricarboxylic acid cycle | Membrane peripheral | 3390936 | +5:AACCT | Frameshift |
 | deaD | DEAD-box RNA helicase | Translation | Cytoplasm | 3314027 | +4:AGAC | Frameshift |
 | yfgO | predicted inner membrane protein | - | Inner membrane | 2623022 | C→T | G30D |
 | gatC | galactitol-specific enzyme IIC component of PTS | Transport | Inner membrane | 2180640 | C→T | E290K |
 | plsX | fatty acid/phospholipid synthesis protein | Fatty acid metabolism | Cytoplasm | 1493514 | A→G | E216G |
 | hrpA | ATP-dependent helicase | RNA processing | Cytoplasm | 1493514 | C→T | L1075L |
 | mdtJ-tqsA | MdtJ SMR protein; transporter of quorum signal AI-2 | Transporter/Transporter | Inner membrane | 1681114 | IS5 insertion | Non-coding region; mdtJ and tqsA promoter region |
 | marC | conserved protein; predicted transporter | - | Inner membrane | 1626081 | IS1 insertion | Disruption |